Single-Cell Multimodal Omics DataBase (scMMDB) is a comprehensive repository for general paired single-cell multimodal omics data, encompassing both epigenomics, transcriptomics and proteomics data, and provides dataset/element search, visualization and download with unified formats.
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Retrived Datasets: 154
Single-cell multiomics defines tolerogenic extrathymic Aire-expressing populations with unique homology to thymic epithelium

Species: Mus musculus

Tissue: mouse thymic epithelium

Disease: none

Technology Type: ATAC_PROTEIN

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High throughput joint profiling of chromatin accessibility and protein levels in single cells [Tcell_Intra]

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

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Single-cell multiomics defines tolerogenic extrathymic Aire-expressing populations with unique homology to thymic epithelium

Species: Mus musculus

Tissue: mouse thymic epithelium

Disease: none

Technology Type: ATAC_PROTEIN

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Single-cell multi-modal profiling of proteins and chromatin accessibility using PHAGE-ATAC

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

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Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Tcell_scATAC_ASAP]

Species: Homo sapiens

Tissue: human blood

Disease: pearson syndrome

Technology Type: ATAC_PROTEIN

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Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Tcell_scATAC_ASAP]

Species: Homo sapiens

Tissue: human blood

Disease: pearson syndrome

Technology Type: ATAC_PROTEIN

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Mosaic integration and knowledge transfer of single-cell multimodal data with MIDAS

Species: Homo sapiens

Tissue: human bone marrow

Disease: none

Technology Type: ATAC_PROTEIN

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Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

More Details
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [BMMNC_scATAC_ASAP]

Species: Homo sapiens

Tissue: human bone marrow

Disease: pearson syndrome

Technology Type: ATAC_PROTEIN

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Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

More Details
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [BMMNC_scATAC_ASAP]

Species: Homo sapiens

Tissue: human bone marrow

Disease: pearson syndrome

Technology Type: ATAC_PROTEIN

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Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [BMMNC_scATAC_ASAP]

Species: Homo sapiens

Tissue: human bone marrow

Disease: pearson syndrome

Technology Type: ATAC_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

More Details
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [BMMNC_scATAC_ASAP]

Species: Homo sapiens

Tissue: human bone marrow

Disease: pearson syndrome

Technology Type: ATAC_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

More Details
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [BMMNC_scATAC_ASAP]

Species: Homo sapiens

Tissue: human bone marrow

Disease: pearson syndrome

Technology Type: ATAC_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_PROTEIN

More Details
SHARE-seqV2 for single-cell epigenomic and transcriptomic mapping of human hematopoiesis at scale

Species: Homo sapiens

Tissue: human bone marrow

Disease: none

Technology Type: ATAC_RNA

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ecDNA hubs drive cooperative intermolecular oncogene expression

Species: Homo sapiens

Tissue: human cell line

Disease: cancer

Technology Type: ATAC_RNA

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A sandbox for prediction and integration of DNA, RNA, and proteins in single cells

Species: Homo sapiens

Tissue: human bone marrow

Disease: none

Technology Type: ATAC_RNA

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Single-cell multi-omics of mitochondrial DNA disorders reveals dynamics of purifying selection across human immune cells

Species: Homo sapiens

Tissue: human blood

Disease: Pearson syndrome

Technology Type: ATAC_RNA

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Multiomic Integration Neuroscience Application Note: Single Cell Multiome RNA + ATAC Alzheimer's Disease Mouse Model Brain Coronal Sections from One Hemisphere Over a Time Course

Species: Mus musculus

Tissue: mouse brain

Disease: alzheimer's disease

Technology Type: ATAC_RNA

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An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome

Species: Mus musculus

Tissue: mouse forebrain

Disease: none

Technology Type: ATAC_RNA

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Mouse Brain Nuclei Isolated with Chromium Nuclei Isolation Kit, SaltyEZ Protocol, and 10x Complex Tissue DP (CT Sorted and CT Unsorted)

Species: Mus musculus

Tissue: mouse brain

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

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Human Kidney Cancer Nuclei isolated with Chromium Nuclei Isolation Kit, SaltyEZ Protocol, and 10x Complex Tissue DP (CT Sorted and CT Unsorted)

Species: Homo sapiens

Tissue: human kidney

Disease: cancer

Technology Type: ATAC_RNA

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An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome

Species: Mus musculus

Tissue: mouse brain cortex

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Homo sapiens

Tissue: human primary motor cortex

Disease: none

Technology Type: ATAC_RNA

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Flash-Frozen Lymph Node with B Cell Lymphoma (14k sorted nuclei)

Species: Homo sapiens

Tissue: human lymph node tumor

Disease: diffuse small lymphocytic lymphoma

Technology Type: ATAC_RNA

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PBMC from a Healthy Donor - Granulocytes Removed Through Cell Sorting (10k)

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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PBMC from a Healthy Donor - No Cell Sorting (10k)

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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PBMC from a healthy donor - granulocytes removed through cell sorting (10k)

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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Trimodal single-cell profiling reveals a novel pediatric CD8+ T cell subset and broad age-related molecular reprogramming across the T cell compartment

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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10k Human PBMCs, Multiome v1.0, Chromium X

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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10k Human PBMCs, Multiome v1.0, Chromium Controller

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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Mitochondrial variant enrichment from high-throughput single-cell RNA-seq resolves clonal populations

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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Joint profiling of chromatin accessibility and gene expression in thousands of single cells

Species: Mus musculus

Tissue: mouse kidney

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Mouse Kidney Nuclei Isolated with Chromium Nuclei Isolation Kit, SaltyEZ Protocol, and 10x Complex Tissue DP (CT Sorted and CT Unsorted)

Species: Mus musculus

Tissue: mouse kidney

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Homo sapiens

Tissue: human primary motor cortex

Disease: none

Technology Type: ATAC_RNA

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Simultaneous profiling of transcriptome and chromatin accessibility in single nucleus

Species: Mus musculus

Tissue: mouse brain cortex

Disease: none

Technology Type: ATAC_RNA

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Bi-order multimodal integration of single-cell data

Species: Mus musculus

Tissue: mouse retina

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Homo sapiens

Tissue: human primary motor cortex

Disease: none

Technology Type: ATAC_RNA

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Chromatin and gene-regulatory dynamics of the developing human cerebral cortex at single-cell resolution

Species: Homo sapiens

Tissue: human brain cortex

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Homo sapiens

Tissue: human primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Simultaneous trimodal single cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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SHARE-seqV2 for single-cell epigenomic and transcriptomic mapping of human hematopoiesis at scale

Species: Homo sapiens

Tissue: human bone marrow

Disease: none

Technology Type: ATAC_RNA

More Details
SHARE-seqV2 for single-cell epigenomic and transcriptomic mapping of human hematopoiesis at scale

Species: Mus musculus

Tissue: mouse colon

Disease: none

Technology Type: ATAC_RNA

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Simultaneous trimodal single cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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Human Jejunum Nuclei Isolated with Chromium Nuclei Isolation Kit, SaltyEZ Protocol, and 10x Complex Tissue DP (CT Sorted and CT Unsorted)

Species: Homo sapiens

Tissue: human jejunum

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Homo sapiens

Tissue: human primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Simultaneous profiling of transcriptome and chromatin accessibility in single nucleus

Species: Mus musculus

Tissue: mouse brain cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

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Fresh Embryonic E18 Mouse Brain (5k)

Species: Mus musculus

Tissue: mouse brain

Disease: none

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Joint profiling of chromatin accessibility and gene expression in thousands of single cells

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

More Details
NEAT-seq: Simultaneous profiling of intra-nuclear proteins, chromatin accessibility, and gene expression in single cells

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

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BABEL enables cross-modality translation between multi-omic profiles at single-cell resolution

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

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An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

More Details
An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome

Species: Mus musculus

Tissue: mouse cell line

Disease: none

Technology Type: ATAC_RNA

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BABEL enables cross-modality translation between multi-omic profiles at single-cell resolution

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

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PBMC from a Healthy Donor - No Cell Sorting (3k)

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

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Flash-Frozen Human Healthy Brain Tissue (3k)

Species: Homo sapiens

Tissue: human brain

Disease: none

Technology Type: ATAC_RNA

More Details
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Mus musculus

Tissue: mouse primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
PBMC from a Healthy Donor - Granulocytes Removed Through Cell Sorting (3k)

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA

More Details
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Homo sapiens

Tissue: human primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Integrative single-cell RNA and ATAC sequencing reveals that the FOXO1-PRDX2-TNF axis regulates tendinopathy

Species: Homo sapiens

Tissue: human achilles tendon

Disease: Tendinopathy

Technology Type: ATAC_RNA

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Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex

Species: Homo sapiens

Tissue: human primary motor cortex

Disease: none

Technology Type: ATAC_RNA

More Details
Simultaneous profiling of transcriptome and chromatin accessibility in single nucleus

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

More Details
SHARE-seqV2 for single-cell epigenomic and transcriptomic mapping of human hematopoiesis at scale

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

More Details
Joint profiling of chromatin accessibility and gene expression in thousands of single cells

Species: Mus musculus

Tissue: mouse cell line

Disease: none

Technology Type: ATAC_RNA

More Details
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

Species: Homo sapiens

Tissue: human cell line

Disease: HeLa-S3 cervix adenocarcinoma

Technology Type: ATAC_RNA

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SHARE-seqV2 for single-cell epigenomic and transcriptomic mapping of human hematopoiesis at scale

Species: Mus musculus

Tissue: mouse cell line

Disease: none

Technology Type: ATAC_RNA

More Details
Joint profiling of chromatin accessibility and gene expression in thousands of single cells

Species: Homo sapiens

Tissue: human cell line

Disease: none

Technology Type: ATAC_RNA

More Details
Comprehensive benchmarking of CITE-seq versus DOGMA-seq single cell multimodal omics

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Comprehensive benchmarking of CITE-seq versus DOGMA-seq single cell multimodal omics

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Comprehensive benchmarking of CITE-seq versus DOGMA-seq single cell multimodal omics

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
NEAT-seq: simultaneous profiling of intra-nuclear proteins, chromatin accessibility and gene expression in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
NEAT-seq: simultaneous profiling of intra-nuclear proteins, chromatin accessibility and gene expression in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: ATAC_RNA_PROTEIN

More Details
Influenza vaccination reveals sex dimorphic imprints of prior mild COVID-19

Species: Homo sapiens

Tissue: human blood

Disease: COVID-19

Technology Type: RNA_PROTEIN

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Multimodally profiling memory T cells from a tuberculosis cohort identifies cell state associations with demographics, environment and disease

Species: Homo sapiens

Tissue: human blood

Disease: peruvian tuberculosis disease

Technology Type: RNA_PROTEIN

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Identifying CNS-colonizing T cells as potential therapeutic targets to prevent progression of multiple sclerosis

Species: Homo sapiens

Tissue: human blood

Disease: multiple sclerosis

Technology Type: RNA_PROTEIN

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Time-resolved systems immunology reveals a late juncture linked to fatal COVID-19

Species: Homo sapiens

Tissue: human blood

Disease: COVID-19

Technology Type: RNA_PROTEIN

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Multimodal pooled Perturb-CITE-seq screens in patient models define mechanisms of cancer immune evasion

Species: Homo sapiens

Tissue: human tumor

Disease: melanoma

Technology Type: RNA_PROTEIN

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An inflammatory state remodels the immune microenvironment and improves risk stratification in acute myeloid leukemia

Species: Homo sapiens

Tissue: human bone marrow

Disease: acute myeloid leukemia

Technology Type: RNA_PROTEIN

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Integrated analysis of multimodal single-cell data

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

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Time-resolved systems immunology reveals a late juncture linked to fatal COVID-19

Species: Homo sapiens

Tissue: human blood

Disease: COVID-19

Technology Type: RNA_PROTEIN

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Immunopathological signatures in multisystem inflammatory syndrome in children and pediatric COVID-19

Species: Homo sapiens

Tissue: human blood

Disease: multisystem inflammatory syndrome; COVID-19

Technology Type: RNA_PROTEIN

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Clonally resolved single-cell multi-omics identifies routes of cellular differentiation in acute myeloid leukemia

Species: Homo sapiens

Tissue: human bone marrow

Disease: acute myeloid leukemia

Technology Type: RNA_PROTEIN

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Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

Species: Mus musculus

Tissue: mouse liver

Disease: none

Technology Type: RNA_PROTEIN

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Single-cell transcriptomics and surface epitope detection in human brain epileptic lesions identifies pro-inflammatory signaling

Species: Homo sapiens

Tissue: human brain

Disease: epilepsy

Technology Type: RNA_PROTEIN

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Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

Species: Homo sapiens

Tissue: human liver

Disease: obese

Technology Type: RNA_PROTEIN

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Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

Species: Mus musculus

Tissue: mouse liver

Disease: nonalcoholic fatty liver disease

Technology Type: RNA_PROTEIN

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Monocyte-derived transcriptome signature indicates antibody-dependent cellular phagocytosis as a potential mechanism of vaccine-induced protection against HIV-1

Species: Homo sapiens

Tissue: human blood

Disease: HIV

Technology Type: RNA_PROTEIN

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Broad immune activation underlies shared set point signatures for vaccine responsiveness in healthy individuals and disease activity in patients with lupus

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

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Murine fetal bone marrow does not support functional hematopoietic stem and progenitor cells until birth

Species: Mus musculus

Tissue: mouse bone marrow

Disease: none

Technology Type: RNA_PROTEIN

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Integrated analysis of multimodal single-cell data

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

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Extensive Remodeling of the Immune Microenvironment in B Cell Acute Lymphoblastic Leukemia

Species: Homo sapiens

Tissue: human bone marrow

Disease: B cell acute lymphoblastic leukemia

Technology Type: RNA_PROTEIN

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Single-cell multi-omics reveals dyssynchrony of the innate and adaptive immune system in progressive COVID-19

Species: Homo sapiens

Tissue: human blood

Disease: COVID-19

Technology Type: RNA_PROTEIN

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Multimodal single-cell analysis of cutaneous T-cell lymphoma reveals distinct subclonal tissue-dependent signatures

Species: Homo sapiens

Tissue: human blood/skin

Disease: cutaneous T cell lymphoma

Technology Type: RNA_PROTEIN

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Multiomics reveals persistence of obesity-associated immune cell phenotypes in adipose tissue during weight loss and weight regain in mice

Species: Mus musculus

Tissue: mouse epididymal adipose

Disease: none

Technology Type: RNA_PROTEIN

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Single-cell antigen-specific landscape of CAR T infusion product identifies determinants of CD19-positive relapse in patients with ALL

Species: Homo sapiens

Tissue: human blood

Disease: acute lymphoblastic leukemia

Technology Type: RNA_PROTEIN

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Single-cell antigen-specific landscape of CAR T infusion product identifies determinants of CD19-positive relapse in patients with ALL

Species: Homo sapiens

Tissue: human blood

Disease: acute lymphoblastic leukemia

Technology Type: RNA_PROTEIN

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Multi-modal profiling of human fetal liver hematopoietic stem cells reveals the molecular signature of engraftment

Species: Homo sapiens

Tissue: human liver

Disease: none

Technology Type: RNA_PROTEIN

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Absence of Batf3 reveals a new dimension of cell state heterogeneity within conventional dendritic cells

Species: Mus musculus

Tissue: mouse spleen

Disease: none

Technology Type: RNA_PROTEIN

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Single-cell antigen-specific landscape of CAR T infusion product identifies determinants of CD19-positive relapse in patients with ALL

Species: Homo sapiens

Tissue: human blood

Disease: acute lymphoblastic leukemia

Technology Type: RNA_PROTEIN

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Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

Species: Sus scrofa

Tissue: pig liver

Disease: none

Technology Type: RNA_PROTEIN

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Joint probabilistic modeling of single-cell multi-omic data with totalVI

Species: Mus musculus

Tissue: mouse spleen/lymph nodes

Disease: none

Technology Type: RNA_PROTEIN

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Single-cell antigen-specific landscape of CAR T infusion product identifies determinants of CD19-positive relapse in patients with ALL

Species: Homo sapiens

Tissue: human blood

Disease: acute lymphoblastic leukemia

Technology Type: RNA_PROTEIN

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Clonal lineage tracing reveals shared origin of conventional and plasmacytoid dendritic cells

Species: Mus musculus

Tissue: mouse bone marrow

Disease: none

Technology Type: RNA_PROTEIN

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Joint probabilistic modeling of single-cell multi-omic data with totalVI

Species: Mus musculus

Tissue: mouse spleen/lymph nodes

Disease: none

Technology Type: RNA_PROTEIN

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Single-cell profiling of myeloid cells in glioblastoma across species and disease stage reveals macrophage competition and specialization

Species: Homo sapiens

Tissue: human glioblastoma

Disease: glioblastoma

Technology Type: RNA_PROTEIN

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T cell-inducing vaccine durably prevents mucosal SHIV infection even with lower neutralizing antibody titers

Species: Macaca mulatta

Tissue: macaca vaginal

Disease: SHIV infection

Technology Type: RNA_PROTEIN

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Single-cell profiling of myeloid cells in glioblastoma across species and disease stage reveals macrophage competition and specialization

Species: Mus musculus

Tissue: mouse glioblastoma

Disease: glioblastoma

Technology Type: RNA_PROTEIN

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Multi-modal Single-Cell Analysis Reveals Brain Immune Landscape Plasticity during Aging and Gut Microbiota Dysbiosis

Species: Mus musculus

Tissue: mouse brain

Disease: none

Technology Type: RNA_PROTEIN

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A RORt+ cell instructs gut microbiota-specific Treg cell differentiation

Species: Mus musculus

Tissue: mouse mesenteric lymph nodes

Disease: none

Technology Type: RNA_PROTEIN

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Clonal lineage tracing reveals shared origin of conventional and plasmacytoid dendritic cells

Species: Mus musculus

Tissue: mouse bone marrow

Disease: none

Technology Type: RNA_PROTEIN

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Single-cell immune landscape of human atherosclerotic plaques

Species: Homo sapiens

Tissue: human blood

Disease: atherosclerosis

Technology Type: RNA_PROTEIN

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Targeting CXCL16 and STAT1 augments immune checkpoint blockade therapy in triple-negative breast cancer

Species: Mus musculus

Tissue: mouse tumor

Disease: breast cancer

Technology Type: RNA_PROTEIN

More Details
JAK2V617F mutation drives vascular resident macrophages toward a pathogenic phenotype and promotes dissecting aortic aneurysm

Species: Mus musculus

Tissue: mouse aorta

Disease: aortic aneurysm

Technology Type: RNA_PROTEIN

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Monocytic Subclones Confer Resistance to Venetoclax-Based Therapy in Patients with Acute Myeloid Leukemia

Species: Homo sapiens

Tissue: human bone marrow

Disease: acute myeloid leukemia

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Tracing tumorigenesis in a solid tumor model at single-cell resolution

Species: Mus musculus

Tissue: mouse submandibular gland

Disease: salivary gland squamous cell carcinoma

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
A conserved dendritic-cell regulatory program limits antitumour immunity

Species: Homo sapiens

Tissue: human lung

Disease: non-small-cell lung cancer

Technology Type: RNA_PROTEIN

More Details
A conserved dendritic-cell regulatory program limits antitumour immunity

Species: Homo sapiens

Tissue: human lung

Disease: non-small-cell lung cancer

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
A conserved dendritic-cell regulatory program limits antitumour immunity

Species: Homo sapiens

Tissue: human lung

Disease: non-small-cell lung cancer

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details
Multiplexed quantification of proteins and transcripts in single cells

Species: Homo sapiens

Tissue: human blood

Disease: none

Technology Type: RNA_PROTEIN

More Details

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